From: Fast Gene Ontology based clustering for microarray experiments
Measure | Number of GO terms | csbl.go | GOSim (vs. csbl.go) | SemSim (vs. csbl.go) |
---|---|---|---|---|
Resnik | 50 | 0.002 s | 4.9 s (2399 ×) | 4.5 s (2158 ×) |
Resnik | 100 | 0.006 s | 19.5 s (3219 ×) | 17.4 s (2880 ×) |
Resnik | 200 | 0.024 s | 77.8 s (3245 ×) | 71.0 s (2963 ×) |
Lin | 50 | 0.002 s | 7.4 s (3612 ×) | 4.5 s (2167 ×) |
Lin | 100 | 0.007 s | 29.5 s (4284 ×) | 17.4 s (2528 ×) |
Lin | 200 | 0.024 s | 117.8 s (4894 ×) | 71.0 s (2950 ×) |
Jiang-Conrath | 50 | 0.002 s | 7.4 s (3590 ×) | 4.5 s (2157 ×) |
Jiang-Conrath | 100 | 0.007 s | 29.5 s (4274 ×) | 17.4 s (2525 ×) |
Jiang-Conrath | 200 | 0.023 s | 117.5 s (5043 ×) | 70.9 s (3043 ×) |
Relevance | 50 | 0.002 s | - | 4.5 s (2062 ×) |
Relevance | 100 | 0.007 s | - | 17.4 s (2400 ×) |
Relevance | 200 | 0.025 s | - | 71.1 s (2866 ×) |