Table 1 List of publicly available transcriptome datasets used in the study
Accession Number | Platform | Description | Number of samples |
|---|---|---|---|
GSE42568 | Affymetrix Array | Normal vs breast cancer gene expression data | Breast cancer: 104 (67 ER +) Normal: 17 |
GSE5200 | Affymetrix Array | Control vs Genistein treated MCF-7 cell lines. 3µM and 10 µM Genisten | 3 samples in each group |
GSE25412 | Affymetrix Array | Control vs Resveratrol treated MCF-7 cell lines. 150mM and 250 mM Resveratrol | 3 samples in each group |
GSE119552 | Agilent Array | Control vs Apigenin treated MCF-7 cell lines. 10µM Apigenin | 4 samples in each group |
GSE23610 | Affymetrix Array | Control vs Ferulic Acid treated MCF-7 cell lines. 0.1 and 1µM Ferulic Acid | 3 samples in each group |
GSE70138 | Broad Institute Human L1000 epsilon | Control vs drug treated/genetically perturbed cell lines | 960 drug perturbations |