Fig. 5From: Estimating sequencing error rates using familiesOur method is sensitive enough to detect differences in performance between different software versions of the GATK variant calling pipeline. We compare precision and recall for 965 samples from iHART using GATKv3.2 and GATKv3.4, using the same raw reads. We see an improvement in both precision and recall at heterozygous sites, and a slight improvement in recall at homozygous alternate sitesBack to article page