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Table 1 Summary of models evaluated by MDR for predicting smallpox outbreak CFRs using VARV SNPs

From: Identification of SNPs associated with variola virus virulence

 

All isolates

Primary cladel I* isolates only

No. SNPs consi-dered

Unadjusted models

Adjusted model

Unadjusted models

 

SNPs in best model

CVC

Testing balance

P

SNPs in best model

CVC

Testing balance

P

SNPs in best model

CVC

Testing balance

P

1

18083

3/5

0.8268

0.018

127469

5/5

0.7365

0.020

183426

4/5

0.8333

0.010

2

Group 1,127469

3/5

0.8562

0.003

Group 1, 127469

4/5

0.8227

<0.001

Group 1, 127469

4/5

0.9042

<0.001

3

75336, 127469, 183083

3/5

0.8268

0.018

127469, Group 2, 42293

3/5

0.8067

<0.001

Group 1, Group 2, 127469

3/5

0.9042

<0.001

  1. *From reference [6].
  2. CVC: cross valid consistency.